DUAL DENOISING AUTOENCODER FEATURE LEARNING FOR CANCER DIAGNOSIS

Yuqing GAO, Wing W. Y. NG, Ting WANG, Sam KWONG

Research output: Book Chapters | Papers in Conference ProceedingsConference paper (refereed)Researchpeer-review

Abstract

Microarray data analysis has emerged as a strong tool for cancer diagnosis. Nevertheless, researches on it are significantly challenging as the microarray datasets are imbalanced and high-dimensional with relatively small sample size. In this paper, we utilized Dual Denoising Autoencoder Features (DDAF), which integrates two Denoising Auto-Encoders (DAE) with different activation function to map the features for both minority and majority classes into a better classification representation. The experimental results on four typical microarray datasets show that the DDAF outperforms the Dual Autoencoder Features (DAF) and the Cost-sensitive Oversampling Stacked Denoising Auto-Encoder (CO-SDAE), rendering the robust ability for dimensionality reduction and imbalanced classification.
Original languageEnglish
Title of host publicationProceedings of 2019 IEEE 18th International Conference on Cognitive Informatics and Cognitive Computing, ICCI*CC 2019
Pages366-371
DOIs
Publication statusPublished - 1 Jul 2019
Externally publishedYes

Keywords

  • denoising autoencoder
  • feature learning
  • imbalanced classification

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