Abstract
Each coil image in a parallel magnetic resonance imaging (pMRI) system is an imaging slice modulated by the corresponding coil sensitivity. These coil images, structurally similar to each other, are stacked together as 3-dimensional (3D) image data, and their sparsity property can be explored via 3D directional Haar tight framelets. The features of the 3D image data from the 3D framelet systems are utilized to regularize sensitivity encoding (SENSE) pMRI reconstruction. Accordingly, a so-called SENSE3d algorithm is proposed to reconstruct images of high quality from the sampled K-space data with a high acceleration rate by decoupling effects of the desired image (slice) and sensitivity maps. Since both the imaging slice and sensitivity maps are unknown, this algorithm repeatedly performs a slice step followed by a sensitivity step by using updated estimations of the desired image and the sensitivity maps. In the slice step, for the given sensitivity maps, the estimation of the desired image is viewed as the solution to a convex optimization problem regularized by the sparsity of its 3D framelet coefficients of coil images. This optimization problem, involving data from the complex field, is solved by a primal-dual three-operator splitting (PD3O) method. In the sensitivity step, the estimation of sensitivity maps is modeled as the solution to a Tikhonovtype optimization problem that favors the smoothness of the sensitivity maps. This corresponding problem is nonconvex and could be solved by a forward-backward splitting method. Experiments on real phantoms and in vivo data show that the proposed SENSE3d algorithm can explore the sparsity property of the imaging slices and efficiently produce reconstructed images of high quality with reduced aliasing artifacts caused by high acceleration rate, additive noise, and the inaccurate estimation of each coil sensitivity. To provide a comprehensive picture of the overall performance of our SENSE3d model, we provide the quantitative index (HaarPSI) and comparisons to some deep learning methods such as VarNet and fastMRI-UNet.
Original language | English |
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Pages (from-to) | 888-916 |
Number of pages | 29 |
Journal | SIAM Journal on Imaging Sciences |
Volume | 17 |
Issue number | 2 |
Early online date | 11 Apr 2024 |
DOIs | |
Publication status | Published - 2024 |
Externally published | Yes |
Bibliographical note
Publisher Copyright:© 2024 Society for Industrial and Applied Mathematics.
Funding
\\ast Received by the editors May 8, 2023; accepted for publication (in revised form) January 29, 2024; published electronically April 11, 2024. https://doi.org/10.1137/23M1571150 Funding: The work of first author was supported in part by Shenzhen Science and Technology Program (grant JCYJ 20230808105610021). The work of second author was supported in part by HKRGC grants CUHK14301718, NCityU214/19, CityU11301120, CityU11309922, C1013-21GF, and CityUGrant9380101. The work of third author was supported in part by the National Science Foundation under grants DMS-1913039 and DMS-2208385, and Syracuse CUSE grant. The work of forth author was supported in part by the Research Grants Council of Hong Kong (projects CityU 11309122 and CityU 11302023).
Keywords
- 3D features
- directional Haar framelet regularization
- fastMRI-UNet
- HaarPSI
- PD3O
- pMRI and SENSE
- structural sparsity
- U-Net
- VarNet